Cnv pathways inside the Logs windows



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Table S4. EASE enrichment of genes in CNV-i. The top 20 categories in EASE are shown along with the genes (represented by gene symbols) in those categories. Shown in order are: gene set; EASE score P value; gene symbols.


CNV pathways inside the LoGS windows

1) interferon-alpha/beta receptor binding; Molecular function; 2.10-12

IFNA10; IFNA13; IFNA16; IFNA17; IFNA2; IFNA21; IFNA4; IFNB1; IFNW1



2) hematopoietin/interferon-class (D200-domain) cytokine receptor binding; Mol function; 2.10-11

IFNA10; IFNA13; IFNA14; IFNA16; IFNA17; IFNA2; IFNA21; IFNA4; IFNA5; IFNA6; IFNA8; IFNB1; IFNW1



3) cytokine activity; Molecular function; 4.10-9

CCL1; CCL11; CCL13; CCL2; CCL7; CCL8; FAM3B; FAM3C; IFNA10; IFNA13; IFNA14; IFNA16; IFNA17; IFNA2; IFNA21; IFNA4; IFNA5; IFNA6; IFNA8; IFNB1; IFNW1



4) response to virus; Biological Process; 10-7

CCL11; CCL8; IFNA10; IFNA17; IFNA21; IFNA4; IFNA6; IFNB1; IFNW1



5) receptor binding; Molecular function; 7.10-7

ADM; CCL1; CCL11; CCL13; CCL2; CCL7; CCL8; FAM3B; FAM3C; FGF12; IFNA10; IFNA13; IFNA14; IFNA16; IFNA17; IFNA2; IFNA21; IFNA4; IFNA5; IFNA6; IFNA8; IFNB1; IFNW1; INSL4; INSL6; LEP; S100A10; SST; TFF1; WNT2



6) antiviral response protein activity; Molecular function; 3.10-6

IFNA10; IFNA17; IFNA21; IFNA4; IFNB1; IFNW1; MX1; MX2



7) extracellular; cellular component; 3.10-5

ADM; AHSG; C13ORF18; CCL1; CCL11; CCL13; CCL2; CCL7; CCL8; COLQ; CPB2; DMRT1; DMRT2; DMRT3; ELN; FAM3B; FAM3C; FETUB; FGF12; HRG; IFNA10; IFNA13; IFNA14; IFNA16; IFNA17; IFNA2; IFNA21; IFNA4; IFNA5; IFNA6; IFNA8; IFNB1; IFNW1; INSL4; INSL6; LEP; MASP1; OAZ3; PTX3; SEMA3A; SEMA3D; SPINK4; SST; TFF3; TPT1; TUFT1; UGCG; WNT16; WNT2; ZPBP



8) Cell-cell signaling; Biological Process; 3.10-5

ADAM10; ADM; CCL1; CCL11; CCL13; CCL2; CCL7; CCL8; CHRNA7; COLQ; FAM3B; FGF12; GABRA5; GABRB3; GABRG3; GRM8; IFNA10; IFNA17; IFNA2; IFNA21; IFNA4; INSL4; LEP; PMP22; SST; WNT16; WNT2



9) signal transducer activity; Molecular function; 2.10-4

ADM; BAG1; C15ORF2; CADPS2; CCL1; CCL11; CCL13; CCL2; CCL7; CCL8; CHRFAM7A; CHRNA7; CLDN3; CLDN4; DDR2; ERG; FAM3B; FAM3C; FGF12; FZD9; GABRA5; GABRB3; GABRG3; GPR128; GPR37; GPR85; GRM8; HTR5A; IFNA10; IFNA13; IFNA14; IFNA16; IFNA17; IFNA2; IFNA21; IFNA4; IFNA5; IFNA6; IFNA8; IFNB1; IFNW1; IL1RAP; INSL4; INSL6; KRTAP13-4; LEP; LRRN1; LRRN3; MET; NR4A2; OPN1SW; OR2D2; PTPRZ1; RGS18; RORC; S100A10; SELENBP1; SEMA3A; SEMA3D; SH3BGR; SH3BP5; SMO; SST; TAS2R16; TFF1; TFG; TMPRSS2; TMPRSS3; WNT16; WNT2



10) chemokine receptor binding; Molecular function; 2.10-3

CCL1; CCL11; CCL13; CCL2; CCL7; CCL8



11) chemokine activity; Molecular function; 2.10-3

CCL1; CCL11; CCL13; CCL2; CCL7; CCL8



12) Neurogenesis; Biological Process; 3.10-3

APBA2; BTD; CRYAA; DSCAM; FGF12; FOXP2; FZD9; IFRD1; LIMK1; NDN; NR4A2; PCP4; PMP22; PTPRZ1; SEMA3A; SEMA3D; SHOX2; TNRC4; UBE3A



13) chemoattractant activity; Molecular function; 3.10-3

CCL1; CCL11; CCL13; CCL2; CCL7; CCL8



14) G-protein-coupled receptor binding; Molecular function; 3.10-3

CCL1; CCL11; CCL13; CCL2; CCL7; CCL8



15) calcium ion homeostasis; Biological Process; 3.10-3

CCL1; CCL11; CCL13; CCL2; CCL7



16) tight junction; Cellular component; 3.10-3

MAPK1; MAPK10; MAPK11; MAPK12; MAPK3; MAPK8



17) extracellular space; Cellular component; 6.10-3

ADM; AHSG; CCL1; CCL11; CCL13; CCL2; CCL7; COLQ; CPB2; ELN; FGF12; HRG; INSL4; LEP; SST; TPT1; UGCG; ZPBP



18) Organogenesis; Biological Process; 7.10-3

AHSG; ANKRD7; APBA2; BTD; CCL2; CRYAA; DMRT1; DMRT2; DSCAM; ELN; ETS2; FGF12; FOXP2; FZD9; IFRD1; LIMK1; MYH13; MYH8; NDN; NR4A2; PAX4; PCP4; PMP22; PTPRZ1; SEMA3A; SEMA3D; SHOX2; TNRC4; TUFT1; UBE3A; UGCG



19) intercellular junction; Cellular component; 8.10-3

CGN; CLDN1; CLDN16; CLDN3; CLDN4; GJA5; GJA8; TJP1



20) defense response; Biological Process; 10-2

BCL6; CCL1; CCL11; CCL13; CCL2; CCL7; CCL8; IFNA10; IFNA13; IFNA14; IFNA16; IFNA17; IFNA2; IFNA21; IFNA4; IFNA5; IFNA6; IFNA8; IFNB1; IFNW1; MASP1; MX1; MX2; NR4A2; PTX3; TFF1; TFF2; TFF3



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